PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G055800.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 238aa    MW: 27043.8 Da    PI: 5.0363
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G055800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.82e-1365117155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                        ++ ah e Er+RR+++Ns +  Lr+llP       ++K s ++   +A++YIk+L+
  Aqcoe7G055800.1.p  65 KKIAHRELERQRRQEMNSLYTSLRSLLPLeY---VKGKRSISDHMYEATNYIKDLE 117
                        6889*************************77...9******************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.58E-1562132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.23E-1162121No hitNo description
PROSITE profilePS5088814.36164116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-1065117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-1366131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-570122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MNNYIYPLYP LQQGDDELLE QIFSTQPIIQ QDMLHEKNLP NSQPCDPPIK SQDTKSLSEA  60
TDSTKKIAHR ELERQRRQEM NSLYTSLRSL LPLEYVKGKR SISDHMYEAT NYIKDLEKNI  120
HELKDKRDKL KIVTNFGTTE ITMTESISGS DFATVRKCWQ GVEVVVSSSL KEVVVSLSRV  180
LEVLLEEGLT AVNCVSSKVD ERLIHTIQAE VMDPAASINT SDLQQRLMSL VQQVEFP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012090357.11e-55PREDICTED: transcription factor bHLH118-like
SwissprotQ9FLI14e-45BH036_ARATH; Transcription factor bHLH36
TrEMBLA0A067JQS61e-55A0A067JQS6_JATCU; Uncharacterized protein
STRINGPOPTR_0012s14080.11e-48(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-38bHLH family protein